Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup88Q8CEC0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup88Q8CEC0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Gm7787-201ENSMUST00000216858 688 ntBASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.48■□□□□ 0.39
Nup88Q8CEC0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup88Q8CEC0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup88Q8CEC0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup88Q8CEC0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup88Q8CEC0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nup88Q8CEC0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup88Q8CEC0 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup88Q8CEC0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms