Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Gm12008-201ENSMUST00000117791 755 ntBASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Gm6550-201ENSMUST00000187574 993 ntBASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Vcpip1Q8CDG3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gm43767-201ENSMUST00000198933 381 ntBASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Vcpip1Q8CDG3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Gm7787-201ENSMUST00000216858 688 ntBASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vcpip1Q8CDG3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.9■□□□□ 0.14
Vcpip1Q8CDG3 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms