Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Gm8515-201ENSMUST00000194852 576 ntBASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.35□□□□□ -0.27
Col6a6Q8C6K9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.34□□□□□ -0.27
Col6a6Q8C6K9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a6Q8C6K9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a6Q8C6K9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Col6a6Q8C6K9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 CT009510.1-201ENSMUST00000227972 270 ntBASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Col6a6Q8C6K9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Gm28760-201ENSMUST00000185995 736 ntBASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col6a6Q8C6K9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms