Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.32■□□□□ 0.36
Usp44Q8C2S0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp44Q8C2S0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Gm18057-201ENSMUST00000208220 503 ntBASIC17.31■□□□□ 0.36
Usp44Q8C2S0 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.31■□□□□ 0.36
Usp44Q8C2S0 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp44Q8C2S0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Gm11745-201ENSMUST00000121669 448 ntBASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Gm37230-201ENSMUST00000194491 818 ntBASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp44Q8C2S0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Gm13365-201ENSMUST00000121188 973 ntBASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Gm12134-201ENSMUST00000122109 520 ntBASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Gm27494-201ENSMUST00000184735 189 ntBASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Gm45098-201ENSMUST00000207179 657 ntBASIC17.29■□□□□ 0.36
Usp44Q8C2S0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.29■□□□□ 0.36
Usp44Q8C2S0 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.29■□□□□ 0.36
Usp44Q8C2S0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp44Q8C2S0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms