Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.95□□□□□ -0.18
Ska3Q8C263 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.95□□□□□ -0.18
Ska3Q8C263 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
Ska3Q8C263 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.95□□□□□ -0.18
Ska3Q8C263 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.95□□□□□ -0.18
Ska3Q8C263 Gm17968-201ENSMUST00000194902 784 ntBASIC13.95□□□□□ -0.18
Ska3Q8C263 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.95□□□□□ -0.18
Ska3Q8C263 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.95□□□□□ -0.18
Ska3Q8C263 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.95□□□□□ -0.18
Ska3Q8C263 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.95□□□□□ -0.18
Ska3Q8C263 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Ska3Q8C263 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ska3Q8C263 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ska3Q8C263 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.94□□□□□ -0.18
Ska3Q8C263 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Ska3Q8C263 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ska3Q8C263 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.94□□□□□ -0.18
Ska3Q8C263 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ska3Q8C263 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.94□□□□□ -0.18
Ska3Q8C263 Gm45747-201ENSMUST00000212203 999 ntBASIC13.94□□□□□ -0.18
Ska3Q8C263 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.94□□□□□ -0.18
Ska3Q8C263 Gm10154-201ENSMUST00000084445 354 ntBASIC13.94□□□□□ -0.18
Ska3Q8C263 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ska3Q8C263 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.93□□□□□ -0.18
Ska3Q8C263 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Ska3Q8C263 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.93□□□□□ -0.18
Ska3Q8C263 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ska3Q8C263 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Gm16198-201ENSMUST00000118766 670 ntBASIC13.93□□□□□ -0.18
Ska3Q8C263 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Gm17271-201ENSMUST00000165535 355 ntBASIC13.93□□□□□ -0.18
Ska3Q8C263 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.93□□□□□ -0.18
Ska3Q8C263 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.93□□□□□ -0.18
Ska3Q8C263 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ska3Q8C263 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ska3Q8C263 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Ska3Q8C263 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ska3Q8C263 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ska3Q8C263 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.92□□□□□ -0.18
Ska3Q8C263 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ska3Q8C263 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ska3Q8C263 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.92□□□□□ -0.18
Ska3Q8C263 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ska3Q8C263 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.92□□□□□ -0.18
Ska3Q8C263 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.92□□□□□ -0.18
Ska3Q8C263 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.92□□□□□ -0.18
Ska3Q8C263 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ska3Q8C263 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.92□□□□□ -0.18
Ska3Q8C263 Gm44492-201ENSMUST00000197012 141 ntBASIC13.92□□□□□ -0.18
Ska3Q8C263 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.92□□□□□ -0.18
Ska3Q8C263 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms