Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smim4Q8C1Q6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gm25990-201ENSMUST00000102440 86 ntBASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gm7977-201ENSMUST00000193787 748 ntBASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gm9682-201ENSMUST00000197505 556 ntBASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim4Q8C1Q6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim4Q8C1Q6 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Smim4Q8C1Q6 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms