Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpne3Q8BT60 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cpne3Q8BT60 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne3Q8BT60 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne3Q8BT60 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.33□□□□□ -0.11
Cpne3Q8BT60 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpne3Q8BT60 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Gm7222-201ENSMUST00000117512 906 ntBASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Gm9682-201ENSMUST00000197505 556 ntBASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.33□□□□□ -0.12
Cpne3Q8BT60 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpne3Q8BT60 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Rps4l-201ENSMUST00000071745 943 ntBASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpne3Q8BT60 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Gm5682-201ENSMUST00000173402 505 ntBASIC14.31□□□□□ -0.12
Cpne3Q8BT60 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.31□□□□□ -0.12
Cpne3Q8BT60 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cpne3Q8BT60 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms