Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cpsf4Q8BQZ5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Gm9727-201ENSMUST00000161387 555 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Gm18489-201ENSMUST00000172565 551 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Gm8318-201ENSMUST00000182954 872 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.38□□□□□ -0.11
Cpsf4Q8BQZ5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Gm5264-201ENSMUST00000190584 848 ntBASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cpsf4Q8BQZ5 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Cpsf4Q8BQZ5 Gm11594-201ENSMUST00000122313 162 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms