Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Gm6283-201ENSMUST00000182369 1000 ntBASIC20.76■□□□□ 0.91
Usp54Q8BL06 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC20.76■□□□□ 0.91
Usp54Q8BL06 AC150560.1-201ENSMUST00000227731 1187 ntBASIC20.76■□□□□ 0.91
Usp54Q8BL06 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp54Q8BL06 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Gm38037-201ENSMUST00000192600 1624 ntBASIC20.75■□□□□ 0.91
Usp54Q8BL06 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Gm27839-201ENSMUST00000184242 106 ntBASIC20.75■□□□□ 0.91
Usp54Q8BL06 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp54Q8BL06 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp54Q8BL06 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp54Q8BL06 AC131068.2-201ENSMUST00000226175 1453 ntBASIC20.73■□□□□ 0.91
Usp54Q8BL06 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Usp54Q8BL06 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Gm7446-201ENSMUST00000221035 1240 ntBASIC20.72■□□□□ 0.91
Usp54Q8BL06 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Gm42901-201ENSMUST00000197735 3171 ntBASIC20.72■□□□□ 0.91
Usp54Q8BL06 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC20.72■□□□□ 0.91
Usp54Q8BL06 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 AC102291.3-201ENSMUST00000226566 405 ntBASIC20.72■□□□□ 0.91
Usp54Q8BL06 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Usp54Q8BL06 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC20.72■□□□□ 0.91
Usp54Q8BL06 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.71■□□□□ 0.91
Usp54Q8BL06 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms