Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Smarcal1Q8BJL0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Syt7-205ENSMUST00000224135 1557 ntBASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Smarcal1Q8BJL0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm15321-201ENSMUST00000121290 288 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm29310-201ENSMUST00000185468 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21825-201ENSMUST00000185728 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm29109-201ENSMUST00000185895 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21896-201ENSMUST00000186520 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21873-201ENSMUST00000186728 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21794-201ENSMUST00000187056 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21880-201ENSMUST00000187275 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21826-201ENSMUST00000187451 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21198-201ENSMUST00000188393 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21749-201ENSMUST00000189343 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21901-201ENSMUST00000189568 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm29424-201ENSMUST00000189716 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm28599-201ENSMUST00000189838 694 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21867-201ENSMUST00000189917 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm29269-201ENSMUST00000190087 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21722-201ENSMUST00000190153 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm28423-201ENSMUST00000190701 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21899-201ENSMUST00000190745 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21910-201ENSMUST00000191163 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21849-201ENSMUST00000191571 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm28678-201ENSMUST00000191593 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm20910-201ENSMUST00000193268 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm21871-201ENSMUST00000194621 696 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm44855-201ENSMUST00000205725 362 ntBASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Smarcal1Q8BJL0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Smarcal1Q8BJL0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms