Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Gm45167-201ENSMUST00000208007 322 ntBASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Gm7787-201ENSMUST00000216858 688 ntBASIC17.4■□□□□ 0.38
Samm50Q8BGH2 AC151836.1-202ENSMUST00000226259 753 ntBASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Samm50Q8BGH2 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Samm50Q8BGH2 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.39■□□□□ 0.38
Samm50Q8BGH2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Samm50Q8BGH2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Samm50Q8BGH2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Gm14140-201ENSMUST00000119999 995 ntBASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Samm50Q8BGH2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Gm12260-201ENSMUST00000122447 411 ntBASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Gm9856-201ENSMUST00000217077 2578 ntBASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Samm50Q8BGH2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Carlr-201ENSMUST00000181515 2574 ntBASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Samm50Q8BGH2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms