Protein–RNA interactions for Protein: Q80ZI6

Lrsam1, E3 ubiquitin-protein ligase LRSAM1, mousemouse

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrsam1Q80ZI6 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lrsam1Q80ZI6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Gm14722-201ENSMUST00000118943 689 ntBASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lrsam1Q80ZI6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44357-201ENSMUST00000195897 142 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm19658-201ENSMUST00000196231 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44367-201ENSMUST00000196836 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44350-201ENSMUST00000197197 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44390-201ENSMUST00000197533 144 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44313-201ENSMUST00000198018 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44486-201ENSMUST00000198508 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44314-201ENSMUST00000199263 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44394-201ENSMUST00000199558 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44484-201ENSMUST00000199873 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44466-201ENSMUST00000200264 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Gm44359-201ENSMUST00000200671 138 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Lrsam1Q80ZI6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Lrsam1Q80ZI6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrsam1Q80ZI6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Lrsam1Q80ZI6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Lrsam1Q80ZI6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms