Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ttc28Q80XJ3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Gm15678-201ENSMUST00000117573 960 ntBASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Mir1982-201ENSMUST00000157368 74 ntBASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Gm37230-201ENSMUST00000194491 818 ntBASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ttc28Q80XJ3 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Gm12957-201ENSMUST00000117835 377 ntBASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Gm12176-201ENSMUST00000121420 875 ntBASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Gm10766-202ENSMUST00000194123 606 ntBASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Celf4-206ENSMUST00000224553 1729 ntBASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ttc28Q80XJ3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ttc28Q80XJ3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ttc28Q80XJ3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ttc28Q80XJ3 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ttc28Q80XJ3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ttc28Q80XJ3 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms