Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rpap1Q80TE0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Gm15460-201ENSMUST00000118147 391 ntBASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Gm15393-201ENSMUST00000120499 219 ntBASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Gm44616-201ENSMUST00000206417 1732 ntBASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rpap1Q80TE0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Gm7558-201ENSMUST00000193221 1165 ntBASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Gm38319-201ENSMUST00000194537 1266 ntBASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 AC154806.6-201ENSMUST00000228192 202 ntBASIC22.71■■□□□ 1.23
Rpap1Q80TE0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rpap1Q80TE0 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Rpap1Q80TE0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Rpap1Q80TE0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Rpap1Q80TE0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Mir7654-201ENSMUST00000185082 70 ntBASIC22.69■■□□□ 1.22
Rpap1Q80TE0 AC153872.1-201ENSMUST00000199539 128 ntBASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Rassf8-202ENSMUST00000058538 1131 ntBASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rpap1Q80TE0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 AC150560.1-201ENSMUST00000227731 1187 ntBASIC22.68■■□□□ 1.22
Rpap1Q80TE0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rpap1Q80TE0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms