Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ush1gQ80T11 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ush1gQ80T11 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.21■□□□□ 0.19
Ush1gQ80T11 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Gm8410-201ENSMUST00000117225 605 ntBASIC16.21■□□□□ 0.19
Ush1gQ80T11 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Mir7684-201ENSMUST00000183858 60 ntBASIC16.21■□□□□ 0.19
Ush1gQ80T11 Gm27306-201ENSMUST00000183970 107 ntBASIC16.21■□□□□ 0.19
Ush1gQ80T11 Gm17837-201ENSMUST00000186435 985 ntBASIC16.21■□□□□ 0.19
Ush1gQ80T11 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ush1gQ80T11 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ush1gQ80T11 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.21■□□□□ 0.18
Ush1gQ80T11 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Gm13453-201ENSMUST00000118708 357 ntBASIC16.2■□□□□ 0.18
Ush1gQ80T11 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.2■□□□□ 0.18
Ush1gQ80T11 Gm12151-201ENSMUST00000121374 290 ntBASIC16.2■□□□□ 0.18
Ush1gQ80T11 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Gm27618-201ENSMUST00000183671 60 ntBASIC16.2■□□□□ 0.18
Ush1gQ80T11 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 CT010506.4-201ENSMUST00000225457 351 ntBASIC16.2■□□□□ 0.18
Ush1gQ80T11 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ush1gQ80T11 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Gm13223-201ENSMUST00000118609 747 ntBASIC16.19■□□□□ 0.18
Ush1gQ80T11 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.19■□□□□ 0.18
Ush1gQ80T11 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ush1gQ80T11 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ush1gQ80T11 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Gm16026-204ENSMUST00000162652 683 ntBASIC16.18■□□□□ 0.18
Ush1gQ80T11 Gm27989-201ENSMUST00000184721 107 ntBASIC16.18■□□□□ 0.18
Ush1gQ80T11 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ush1gQ80T11 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.18■□□□□ 0.18
Ush1gQ80T11 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.18■□□□□ 0.18
Ush1gQ80T11 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms