Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Gm12490-201ENSMUST00000120255 560 ntBASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Gm7730-201ENSMUST00000212486 454 ntBASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.52■□□□□ 0.08
Prpf38bQ80SY5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Prpf38bQ80SY5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Mir1938-201ENSMUST00000158746 100 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Rpph1-201ENSMUST00000175096 319 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 BC037039-201ENSMUST00000192003 2205 ntBASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf38bQ80SY5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Gm13223-201ENSMUST00000118609 747 ntBASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Gm9899-201ENSMUST00000065519 555 ntBASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf38bQ80SY5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf38bQ80SY5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms