Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Mir449b-201ENSMUST00000104833 80 ntBASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Gm14057-201ENSMUST00000120631 482 ntBASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Gm11543-201ENSMUST00000120758 370 ntBASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Gm24158-201ENSMUST00000175263 71 ntBASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh8Q7TSK3 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Gm6973-201ENSMUST00000117080 721 ntBASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Gm16026-204ENSMUST00000162652 683 ntBASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Gm27430-201ENSMUST00000184585 107 ntBASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Gm44333-201ENSMUST00000197168 107 ntBASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdh8Q7TSK3 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Gm10253-201ENSMUST00000194270 940 ntBASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdh8Q7TSK3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms