Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Ddx55Q6ZPL9 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx55Q6ZPL9 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx55Q6ZPL9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.77■□□□□ 0.27
Ddx55Q6ZPL9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx55Q6ZPL9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx55Q6ZPL9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx55Q6ZPL9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 BC001981-202ENSMUST00000191393 1545 ntBASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Gm15806-201ENSMUST00000120696 955 ntBASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Gm17150-201ENSMUST00000165577 381 ntBASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Gm6916-202ENSMUST00000205523 195 ntBASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Gm8131-201ENSMUST00000213783 1570 ntBASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx55Q6ZPL9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Gm19220-201ENSMUST00000222682 803 ntBASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 AC159006.1-201ENSMUST00000226396 258 ntBASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx55Q6ZPL9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Gm12585-201ENSMUST00000117307 290 ntBASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Gm9726-201ENSMUST00000180321 678 ntBASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Ddx55Q6ZPL9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx55Q6ZPL9 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms