Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Gm5745-201ENSMUST00000183748 313 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Gm27920-201ENSMUST00000183953 96 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Gm38225-201ENSMUST00000194001 393 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Gm2451-201ENSMUST00000199447 999 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Gm10290-201ENSMUST00000200451 999 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.73■□□□□ 0.43
Npc1l1Q6T3U4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Gm27437-201ENSMUST00000183429 107 ntBASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Npc1l1Q6T3U4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Npc1l1Q6T3U4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Gm23547-201ENSMUST00000158210 271 ntBASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Npc1l1Q6T3U4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Gm17837-201ENSMUST00000186435 985 ntBASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Npc1l1Q6T3U4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms