Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ddx58Q6Q899 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
Ddx58Q6Q899 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ddx58Q6Q899 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ddx58Q6Q899 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Gm5566-201ENSMUST00000116118 459 ntBASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Gm9719-201ENSMUST00000162765 543 ntBASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ddx58Q6Q899 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx58Q6Q899 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx58Q6Q899 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ddx58Q6Q899 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ddx58Q6Q899 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Gm27533-201ENSMUST00000183800 152 ntBASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Gm7063-201ENSMUST00000186840 981 ntBASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Gm37230-201ENSMUST00000194491 818 ntBASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ddx58Q6Q899 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms