Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Gm8805-201ENSMUST00000117848 313 ntBASIC12.45□□□□□ -0.42
Rif1Q6PR54 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.45□□□□□ -0.42
Rif1Q6PR54 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.45□□□□□ -0.42
Rif1Q6PR54 Gm37835-201ENSMUST00000193305 361 ntBASIC12.45□□□□□ -0.42
Rif1Q6PR54 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rif1Q6PR54 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Gm4909-201ENSMUST00000118749 794 ntBASIC12.44□□□□□ -0.42
Rif1Q6PR54 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Gm27839-201ENSMUST00000184242 106 ntBASIC12.44□□□□□ -0.42
Rif1Q6PR54 Gm7467-201ENSMUST00000185173 652 ntBASIC12.44□□□□□ -0.42
Rif1Q6PR54 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.44□□□□□ -0.42
Rif1Q6PR54 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rif1Q6PR54 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Mir1894-201ENSMUST00000122802 81 ntBASIC12.43□□□□□ -0.42
Rif1Q6PR54 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.43□□□□□ -0.42
Rif1Q6PR54 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.43□□□□□ -0.42
Rif1Q6PR54 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.43□□□□□ -0.42
Rif1Q6PR54 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rif1Q6PR54 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Mir6979-201ENSMUST00000183927 56 ntBASIC12.42□□□□□ -0.42
Rif1Q6PR54 Gm8969-201ENSMUST00000199694 526 ntBASIC12.42□□□□□ -0.42
Rif1Q6PR54 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.42□□□□□ -0.42
Rif1Q6PR54 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rif1Q6PR54 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms