Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 AC102291.3-201ENSMUST00000226566 405 ntBASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Chd4Q6PDQ2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Gm15393-201ENSMUST00000120499 219 ntBASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 AC154806.6-201ENSMUST00000228192 202 ntBASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC19.07■□□□□ 0.64
Chd4Q6PDQ2 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Gm12341-201ENSMUST00000119724 503 ntBASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Gm5354-201ENSMUST00000182417 973 ntBASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Mir6392-201ENSMUST00000184924 108 ntBASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Gm43433-201ENSMUST00000196573 481 ntBASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Gm15823-201ENSMUST00000064305 670 ntBASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd4Q6PDQ2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd4Q6PDQ2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Gm15222-202ENSMUST00000228667 1726 ntBASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC19.04■□□□□ 0.64
Chd4Q6PDQ2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms