Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smarcd3Q6P9Z1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Gm9103-201ENSMUST00000119371 405 ntBASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Gm11780-201ENSMUST00000136880 516 ntBASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smarcd3Q6P9Z1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Gm18669-201ENSMUST00000216049 778 ntBASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcd3Q6P9Z1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gm4535-201ENSMUST00000182274 558 ntBASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gm10355-201ENSMUST00000097146 517 ntBASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms