Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.04■□□□□ -0
Sp140Q6NSQ5 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sp140Q6NSQ5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.03■□□□□ -0
Sp140Q6NSQ5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.03■□□□□ -0
Sp140Q6NSQ5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.03■□□□□ -0
Sp140Q6NSQ5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.03■□□□□ -0
Sp140Q6NSQ5 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sp140Q6NSQ5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Gm12008-201ENSMUST00000117791 755 ntBASIC15.02■□□□□ -0
Sp140Q6NSQ5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sp140Q6NSQ5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sp140Q6NSQ5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Gm23547-201ENSMUST00000158210 271 ntBASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Gm27741-201ENSMUST00000185060 237 ntBASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Mzt1-203ENSMUST00000227948 952 ntBASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sp140Q6NSQ5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms