Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Gm8344-201ENSMUST00000119813 856 ntBASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt42Q6IFX2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.21■□□□□ 0.03
Krt42Q6IFX2 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Gm43767-201ENSMUST00000198933 381 ntBASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt42Q6IFX2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt42Q6IFX2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt42Q6IFX2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Krt42Q6IFX2 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms