Protein–RNA interactions for Protein: Q68FH0

Pkp4, Plakophilin-4, mousemouse

Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4Q68FH0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Pkp4Q68FH0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Carlr-201ENSMUST00000181515 2574 ntBASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Gm12134-201ENSMUST00000122109 520 ntBASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pkp4Q68FH0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.16□□□□□ -0.14
Pkp4Q68FH0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Gm27300-201ENSMUST00000184085 97 ntBASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Gm27335-201ENSMUST00000184758 97 ntBASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Gm27741-201ENSMUST00000185060 237 ntBASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Pkp4Q68FH0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms