Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Clns1aQ61189 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Clns1aQ61189 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.7□□□□□ -0.38
Clns1aQ61189 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Clns1aQ61189 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Celf4-206ENSMUST00000224553 1729 ntBASIC12.69□□□□□ -0.38
Clns1aQ61189 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.69□□□□□ -0.38
Clns1aQ61189 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Clns1aQ61189 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.69□□□□□ -0.38
Clns1aQ61189 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.68□□□□□ -0.38
Clns1aQ61189 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Clns1aQ61189 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clns1aQ61189 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.68□□□□□ -0.38
Clns1aQ61189 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clns1aQ61189 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clns1aQ61189 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clns1aQ61189 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Clns1aQ61189 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clns1aQ61189 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms