Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Irf9Q61179 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Irf9Q61179 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Irf9Q61179 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.39■□□□□ 0.53
Irf9Q61179 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Irf9Q61179 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Irf9Q61179 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.38■□□□□ 0.53
Irf9Q61179 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.38■□□□□ 0.53
Irf9Q61179 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC18.38■□□□□ 0.53
Irf9Q61179 Gm27306-201ENSMUST00000183970 107 ntBASIC18.38■□□□□ 0.53
Irf9Q61179 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Gm37230-201ENSMUST00000194491 818 ntBASIC18.38■□□□□ 0.53
Irf9Q61179 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Irf9Q61179 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf9Q61179 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.37■□□□□ 0.53
Irf9Q61179 Gm13453-201ENSMUST00000118708 357 ntBASIC18.37■□□□□ 0.53
Irf9Q61179 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.37■□□□□ 0.53
Irf9Q61179 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.37■□□□□ 0.53
Irf9Q61179 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.37■□□□□ 0.53
Irf9Q61179 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.37■□□□□ 0.53
Irf9Q61179 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf9Q61179 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf9Q61179 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Irf9Q61179 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Irf9Q61179 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Irf9Q61179 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Irf9Q61179 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.36■□□□□ 0.53
Irf9Q61179 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Gm5566-201ENSMUST00000116118 459 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm12151-201ENSMUST00000121374 290 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Gm9719-201ENSMUST00000162765 543 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Irf9Q61179 Gm29310-201ENSMUST00000185468 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21825-201ENSMUST00000185728 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm29109-201ENSMUST00000185895 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21896-201ENSMUST00000186520 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21873-201ENSMUST00000186728 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21794-201ENSMUST00000187056 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21880-201ENSMUST00000187275 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21826-201ENSMUST00000187451 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21198-201ENSMUST00000188393 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21749-201ENSMUST00000189343 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21901-201ENSMUST00000189568 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm29424-201ENSMUST00000189716 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm28599-201ENSMUST00000189838 694 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21867-201ENSMUST00000189917 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm29269-201ENSMUST00000190087 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21722-201ENSMUST00000190153 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm28423-201ENSMUST00000190701 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21899-201ENSMUST00000190745 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21910-201ENSMUST00000191163 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21849-201ENSMUST00000191571 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm28678-201ENSMUST00000191593 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm20910-201ENSMUST00000193268 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm21871-201ENSMUST00000194621 696 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Irf9Q61179 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Irf9Q61179 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC18.36■□□□□ 0.53
Irf9Q61179 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC18.36■□□□□ 0.53
Irf9Q61179 Gm9182-201ENSMUST00000217829 639 ntBASIC18.36■□□□□ 0.53
Irf9Q61179 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms