Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.52□□□□□ -0.41
Scarb1Q61009 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Gm15794-201ENSMUST00000120182 631 ntBASIC12.52□□□□□ -0.41
Scarb1Q61009 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Gm23547-201ENSMUST00000158210 271 ntBASIC12.52□□□□□ -0.41
Scarb1Q61009 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Scarb1Q61009 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.52□□□□□ -0.41
Scarb1Q61009 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.52□□□□□ -0.41
Scarb1Q61009 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.52□□□□□ -0.41
Scarb1Q61009 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.52□□□□□ -0.41
Scarb1Q61009 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.52□□□□□ -0.41
Scarb1Q61009 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.52□□□□□ -0.41
Scarb1Q61009 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.52□□□□□ -0.41
Scarb1Q61009 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Scarb1Q61009 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.52□□□□□ -0.41
Scarb1Q61009 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Scarb1Q61009 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.52□□□□□ -0.41
Scarb1Q61009 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Rprl3-201ENSMUST00000157400 290 ntBASIC12.51□□□□□ -0.41
Scarb1Q61009 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.51□□□□□ -0.41
Scarb1Q61009 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.51□□□□□ -0.41
Scarb1Q61009 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.51□□□□□ -0.41
Scarb1Q61009 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scarb1Q61009 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scarb1Q61009 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Scarb1Q61009 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Scarb1Q61009 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.5□□□□□ -0.41
Scarb1Q61009 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.5□□□□□ -0.41
Scarb1Q61009 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scarb1Q61009 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scarb1Q61009 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.5□□□□□ -0.41
Scarb1Q61009 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.5□□□□□ -0.41
Scarb1Q61009 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.5□□□□□ -0.41
Scarb1Q61009 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.5□□□□□ -0.41
Scarb1Q61009 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.5□□□□□ -0.41
Scarb1Q61009 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Scarb1Q61009 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scarb1Q61009 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scarb1Q61009 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms