Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.41□□□□□ -0.1
Col12a1Q60847 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col12a1Q60847 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.4□□□□□ -0.1
Col12a1Q60847 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.4□□□□□ -0.1
Col12a1Q60847 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.4□□□□□ -0.1
Col12a1Q60847 Gm29649-201ENSMUST00000185649 419 ntBASIC14.4□□□□□ -0.1
Col12a1Q60847 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.4□□□□□ -0.1
Col12a1Q60847 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.4□□□□□ -0.1
Col12a1Q60847 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.4□□□□□ -0.1
Col12a1Q60847 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.4□□□□□ -0.1
Col12a1Q60847 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col12a1Q60847 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col12a1Q60847 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Col12a1Q60847 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.39□□□□□ -0.11
Col12a1Q60847 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.39□□□□□ -0.11
Col12a1Q60847 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Gm45098-201ENSMUST00000207179 657 ntBASIC14.39□□□□□ -0.11
Col12a1Q60847 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.39□□□□□ -0.11
Col12a1Q60847 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.39□□□□□ -0.11
Col12a1Q60847 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Gm12928-201ENSMUST00000117115 573 ntBASIC14.39□□□□□ -0.11
Col12a1Q60847 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col12a1Q60847 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col12a1Q60847 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Gm7783-201ENSMUST00000204795 781 ntBASIC14.38□□□□□ -0.11
Col12a1Q60847 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Gm15429-201ENSMUST00000151268 798 ntBASIC14.38□□□□□ -0.11
Col12a1Q60847 Gm24644-201ENSMUST00000157114 139 ntBASIC14.38□□□□□ -0.11
Col12a1Q60847 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col12a1Q60847 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col12a1Q60847 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col12a1Q60847 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col12a1Q60847 Mir5132-201ENSMUST00000175166 71 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms