Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Xrcc1Q60596 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xrcc1Q60596 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Xrcc1Q60596 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Xrcc1Q60596 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Xrcc1Q60596 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Gm43575-201ENSMUST00000196420 516 ntBASIC14.17□□□□□ -0.14
Xrcc1Q60596 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.17□□□□□ -0.14
Xrcc1Q60596 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.17□□□□□ -0.14
Xrcc1Q60596 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Xrcc1Q60596 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.17□□□□□ -0.14
Xrcc1Q60596 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.16□□□□□ -0.14
Xrcc1Q60596 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.16□□□□□ -0.14
Xrcc1Q60596 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Gm5867-201ENSMUST00000063197 592 ntBASIC14.16□□□□□ -0.14
Xrcc1Q60596 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.16□□□□□ -0.14
Xrcc1Q60596 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Xrcc1Q60596 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Gm23935-201ENSMUST00000102303 57 ntBASIC14.15□□□□□ -0.14
Xrcc1Q60596 Gm24270-201ENSMUST00000102326 57 ntBASIC14.15□□□□□ -0.14
Xrcc1Q60596 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Gm24245-201ENSMUST00000157318 57 ntBASIC14.15□□□□□ -0.14
Xrcc1Q60596 Gm27494-201ENSMUST00000184735 189 ntBASIC14.15□□□□□ -0.14
Xrcc1Q60596 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.15□□□□□ -0.14
Xrcc1Q60596 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.15□□□□□ -0.14
Xrcc1Q60596 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Xrcc1Q60596 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Xrcc1Q60596 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms