Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmn1r223Q5SSA0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.99□□□□□ -0.33
Vmn1r223Q5SSA0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vmn1r223Q5SSA0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vmn1r223Q5SSA0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.99□□□□□ -0.33
Vmn1r223Q5SSA0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Gm13884-201ENSMUST00000118103 829 ntBASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vmn1r223Q5SSA0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Mzt1-203ENSMUST00000227948 952 ntBASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vmn1r223Q5SSA0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Gm6376-201ENSMUST00000209407 580 ntBASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vmn1r223Q5SSA0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms