Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Vps54Q5SPW0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.77■□□□□ 0.44
Vps54Q5SPW0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Gm2451-201ENSMUST00000199447 999 ntBASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Gm10290-201ENSMUST00000200451 999 ntBASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.77■□□□□ 0.44
Vps54Q5SPW0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Vps54Q5SPW0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps54Q5SPW0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps54Q5SPW0 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Vps54Q5SPW0 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.77■□□□□ 0.43
Vps54Q5SPW0 Carlr-201ENSMUST00000181515 2574 ntBASIC17.77■□□□□ 0.43
Vps54Q5SPW0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Gm8749-201ENSMUST00000117737 331 ntBASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Gm5312-201ENSMUST00000203728 547 ntBASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vps54Q5SPW0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vps54Q5SPW0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Gm5479-201ENSMUST00000160578 435 ntBASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Vps54Q5SPW0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms