Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Gm38318-201ENSMUST00000195769 1706 ntBASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-1Q5R1I8 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Gm18755-201ENSMUST00000218030 1099 ntBASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Spcs1-204ENSMUST00000226782 949 ntBASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Gm5576-201ENSMUST00000075809 1236 ntBASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-1Q5R1I8 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Trav3-1Q5R1I8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms