Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav5d-4Q5R1F6 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5d-4Q5R1F6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Gm2651-201ENSMUST00000203560 838 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5d-4Q5R1F6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav5d-4Q5R1F6 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms