Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Gm7783-201ENSMUST00000204795 781 ntBASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Gm24526-201ENSMUST00000082921 158 ntBASIC14.04□□□□□ -0.16
Col27a1Q5QNQ9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Gm37259-201ENSMUST00000193903 849 ntBASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col27a1Q5QNQ9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Gm16177-201ENSMUST00000120728 718 ntBASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col27a1Q5QNQ9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col27a1Q5QNQ9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Gm12485-201ENSMUST00000119641 291 ntBASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Gm6152-201ENSMUST00000151704 340 ntBASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col27a1Q5QNQ9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col27a1Q5QNQ9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms