Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim41Q5NCC3 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Trav13-3-201ENSMUST00000117226 336 ntBASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Gm15198-201ENSMUST00000117283 177 ntBASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Gm45098-201ENSMUST00000207179 657 ntBASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Gm7775-201ENSMUST00000218871 853 ntBASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim41Q5NCC3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
Trim41Q5NCC3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Gm8749-201ENSMUST00000117737 331 ntBASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim41Q5NCC3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim41Q5NCC3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Gm44344-201ENSMUST00000200287 129 ntBASIC25.55■■□□□ 1.68
Trim41Q5NCC3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim41Q5NCC3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Gm43195-201ENSMUST00000200614 2332 ntBASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Gm24543-201ENSMUST00000103867 82 ntBASIC25.54■■□□□ 1.68
Trim41Q5NCC3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Gm11839-201ENSMUST00000120647 1953 ntBASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
Trim41Q5NCC3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Gm24694-201ENSMUST00000180054 110 ntBASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Gm27663-201ENSMUST00000184839 110 ntBASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Gm42693-201ENSMUST00000196779 631 ntBASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC25.53■■□□□ 1.68
Trim41Q5NCC3 Gm44616-201ENSMUST00000206417 1732 ntBASIC25.53■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms