Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf20Q5DTM8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf20Q5DTM8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf20Q5DTM8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Gm1401-201ENSMUST00000122048 772 ntBASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf20Q5DTM8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms