Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Trim80Q3V061 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Trim80Q3V061 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.34■□□□□ 0.05
Trim80Q3V061 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.34■□□□□ 0.05
Trim80Q3V061 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trim80Q3V061 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.34■□□□□ 0.05
Trim80Q3V061 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim80Q3V061 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trim80Q3V061 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trim80Q3V061 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.33■□□□□ 0.05
Trim80Q3V061 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.33■□□□□ 0.05
Trim80Q3V061 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim80Q3V061 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trim80Q3V061 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trim80Q3V061 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.33■□□□□ 0.04
Trim80Q3V061 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim80Q3V061 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.33■□□□□ 0.04
Trim80Q3V061 Gm6296-201ENSMUST00000222599 943 ntBASIC15.33■□□□□ 0.04
Trim80Q3V061 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.33■□□□□ 0.04
Trim80Q3V061 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim80Q3V061 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trim80Q3V061 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.33■□□□□ 0.04
Trim80Q3V061 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim80Q3V061 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Mir6404-201ENSMUST00000183699 94 ntBASIC15.32■□□□□ 0.04
Trim80Q3V061 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.32■□□□□ 0.04
Trim80Q3V061 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Gm44430-201ENSMUST00000203376 995 ntBASIC15.32■□□□□ 0.04
Trim80Q3V061 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trim80Q3V061 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim80Q3V061 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim80Q3V061 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim80Q3V061 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms