Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rapgef1Q3UHC1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rapgef1Q3UHC1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rapgef1Q3UHC1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rapgef1Q3UHC1 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rapgef1Q3UHC1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rapgef1Q3UHC1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rapgef1Q3UHC1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Rapgef1Q3UHC1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Mir3113-201ENSMUST00000175478 76 ntBASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rapgef1Q3UHC1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rapgef1Q3UHC1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.18■□□□□ 0.18
Rapgef1Q3UHC1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms