Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.42■□□□□ 0.38
Limch1Q3UH68 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Limch1Q3UH68 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Gm17968-201ENSMUST00000194902 784 ntBASIC17.41■□□□□ 0.38
Limch1Q3UH68 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Gm18246-201ENSMUST00000221023 728 ntBASIC17.41■□□□□ 0.38
Limch1Q3UH68 Gm8396-201ENSMUST00000057361 823 ntBASIC17.41■□□□□ 0.38
Limch1Q3UH68 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.41■□□□□ 0.38
Limch1Q3UH68 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.41■□□□□ 0.38
Limch1Q3UH68 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Limch1Q3UH68 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Gm13597-201ENSMUST00000121239 375 ntBASIC17.4■□□□□ 0.38
Limch1Q3UH68 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.4■□□□□ 0.38
Limch1Q3UH68 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.4■□□□□ 0.38
Limch1Q3UH68 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Limch1Q3UH68 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Limch1Q3UH68 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.39■□□□□ 0.38
Limch1Q3UH68 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Limch1Q3UH68 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Limch1Q3UH68 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms