Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Gm12008-201ENSMUST00000117791 755 ntBASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.96□□□□□ -0.17
Brf2Q3UAW9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.96□□□□□ -0.17
Brf2Q3UAW9 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.96□□□□□ -0.17
Brf2Q3UAW9 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Brf2Q3UAW9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Brf2Q3UAW9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Gm12350-201ENSMUST00000121208 462 ntBASIC13.95□□□□□ -0.18
Brf2Q3UAW9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Gm27300-201ENSMUST00000184085 97 ntBASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Gm27335-201ENSMUST00000184758 97 ntBASIC13.95□□□□□ -0.18
Brf2Q3UAW9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf2Q3UAW9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Mzt1-203ENSMUST00000227948 952 ntBASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf2Q3UAW9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf2Q3UAW9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms