Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Gm17971-201ENSMUST00000190239 806 ntBASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Gm18622-201ENSMUST00000219361 595 ntBASIC12.67□□□□□ -0.38
Fndc4Q3TR08 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Birc2-201ENSMUST00000054878 378 ntBASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Grk6-207ENSMUST00000225925 2769 ntBASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Fndc4Q3TR08 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Gm34391-201ENSMUST00000203706 907 ntBASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Fndc4Q3TR08 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Gm8655-201ENSMUST00000221159 852 ntBASIC12.65□□□□□ -0.38
Fndc4Q3TR08 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Fndc4Q3TR08 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms