Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Gm5312-201ENSMUST00000203728 547 ntBASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Gm45612-201ENSMUST00000211320 160 ntBASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Khdc4Q3TCX3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc4Q3TCX3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Gm12008-201ENSMUST00000117791 755 ntBASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc4Q3TCX3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms