Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Q3KNL4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Q3KNL4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Q3KNL4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Q3KNL4 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.59□□□□□ -0.07
Q3KNL4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Q3KNL4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Q3KNL4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Q3KNL4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Q3KNL4 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Q3KNL4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Q3KNL4 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.58□□□□□ -0.08
Q3KNL4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Q3KNL4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.58□□□□□ -0.08
Q3KNL4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Gm28033-201ENSMUST00000184224 96 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm21362-201ENSMUST00000194272 928 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44357-201ENSMUST00000195897 142 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm19658-201ENSMUST00000196231 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44367-201ENSMUST00000196836 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44350-201ENSMUST00000197197 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44390-201ENSMUST00000197533 144 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44313-201ENSMUST00000198018 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44486-201ENSMUST00000198508 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44314-201ENSMUST00000199263 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44394-201ENSMUST00000199558 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44484-201ENSMUST00000199873 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44466-201ENSMUST00000200264 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Gm44359-201ENSMUST00000200671 138 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.58□□□□□ -0.08
Q3KNL4 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.58□□□□□ -0.08
Q3KNL4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Q3KNL4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Q3KNL4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Q3KNL4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Q3KNL4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.57□□□□□ -0.08
Q3KNL4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Q3KNL4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Q3KNL4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Q3KNL4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.57□□□□□ -0.08
Q3KNL4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.57□□□□□ -0.08
Q3KNL4 Gm37153-201ENSMUST00000193637 231 ntBASIC14.57□□□□□ -0.08
Q3KNL4 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.57□□□□□ -0.08
Q3KNL4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.57□□□□□ -0.08
Q3KNL4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Q3KNL4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Q3KNL4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.57□□□□□ -0.08
Q3KNL4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.56□□□□□ -0.08
Q3KNL4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.56□□□□□ -0.08
Q3KNL4 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Q3KNL4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.56□□□□□ -0.08
Q3KNL4 Gm12134-201ENSMUST00000122109 520 ntBASIC14.56□□□□□ -0.08
Q3KNL4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.56□□□□□ -0.08
Q3KNL4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.56□□□□□ -0.08
Q3KNL4 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.56□□□□□ -0.08
Q3KNL4 Gm6089-201ENSMUST00000197666 938 ntBASIC14.56□□□□□ -0.08
Q3KNL4 Gm43767-201ENSMUST00000198933 381 ntBASIC14.56□□□□□ -0.08
Q3KNL4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.56□□□□□ -0.08
Q3KNL4 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Q3KNL4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Q3KNL4 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.56□□□□□ -0.08
Q3KNL4 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms