Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Gm27331-201ENSMUST00000183705 60 ntBASIC13.15□□□□□ -0.3
Chd8Q09XV5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.15□□□□□ -0.3
Chd8Q09XV5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Chd8Q09XV5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Chd8Q09XV5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Chd8Q09XV5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.15□□□□□ -0.31
Chd8Q09XV5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Gm16479-201ENSMUST00000121706 932 ntBASIC13.14□□□□□ -0.31
Chd8Q09XV5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.14□□□□□ -0.31
Chd8Q09XV5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Gm13612-201ENSMUST00000119276 390 ntBASIC13.14□□□□□ -0.31
Chd8Q09XV5 Gm14665-201ENSMUST00000122294 557 ntBASIC13.14□□□□□ -0.31
Chd8Q09XV5 Gm44126-201ENSMUST00000204831 514 ntBASIC13.14□□□□□ -0.31
Chd8Q09XV5 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.14□□□□□ -0.31
Chd8Q09XV5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd8Q09XV5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.13□□□□□ -0.31
Chd8Q09XV5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Gm2260-201ENSMUST00000184965 657 ntBASIC13.13□□□□□ -0.31
Chd8Q09XV5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.13□□□□□ -0.31
Chd8Q09XV5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.13□□□□□ -0.31
Chd8Q09XV5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Mir1943-201ENSMUST00000158276 73 ntBASIC13.13□□□□□ -0.31
Chd8Q09XV5 Gm9540-201ENSMUST00000188230 478 ntBASIC13.13□□□□□ -0.31
Chd8Q09XV5 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chd8Q09XV5 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Gm8810-201ENSMUST00000172895 754 ntBASIC13.12□□□□□ -0.31
Chd8Q09XV5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Chd8Q09XV5 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.12□□□□□ -0.31
Chd8Q09XV5 Gm33320-201ENSMUST00000192232 530 ntBASIC13.12□□□□□ -0.31
Chd8Q09XV5 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.12□□□□□ -0.31
Chd8Q09XV5 Gm19208-201ENSMUST00000213861 912 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms