Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Tff1Q08423 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.33□□□□□ -0.44
Tff1Q08423 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.33□□□□□ -0.44
Tff1Q08423 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Tff1Q08423 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.33□□□□□ -0.44
Tff1Q08423 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.33□□□□□ -0.44
Tff1Q08423 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tff1Q08423 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Tff1Q08423 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tff1Q08423 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.32□□□□□ -0.44
Tff1Q08423 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.32□□□□□ -0.44
Tff1Q08423 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tff1Q08423 Gm27397-201ENSMUST00000184997 107 ntBASIC12.32□□□□□ -0.44
Tff1Q08423 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tff1Q08423 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.32□□□□□ -0.44
Tff1Q08423 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Gm8655-201ENSMUST00000221159 852 ntBASIC12.32□□□□□ -0.44
Tff1Q08423 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tff1Q08423 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Tff1Q08423 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tff1Q08423 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.31□□□□□ -0.44
Tff1Q08423 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.31□□□□□ -0.44
Tff1Q08423 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms