Protein–RNA interactions for Protein: Q02788

Col6a2, Collagen alpha-2(VI) chain, mousemouse

Predictions only

Length 1,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a2Q02788 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.79□□□□□ -0.04
Col6a2Q02788 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.79□□□□□ -0.04
Col6a2Q02788 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.79□□□□□ -0.04
Col6a2Q02788 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col6a2Q02788 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Col6a2Q02788 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.78□□□□□ -0.04
Col6a2Q02788 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Col6a2Q02788 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Col6a2Q02788 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col6a2Q02788 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Gm24158-201ENSMUST00000175263 71 ntBASIC14.78□□□□□ -0.04
Col6a2Q02788 Gm27920-201ENSMUST00000183953 96 ntBASIC14.78□□□□□ -0.04
Col6a2Q02788 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.78□□□□□ -0.04
Col6a2Q02788 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.78□□□□□ -0.04
Col6a2Q02788 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.78□□□□□ -0.04
Col6a2Q02788 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.78□□□□□ -0.04
Col6a2Q02788 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.78□□□□□ -0.04
Col6a2Q02788 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col6a2Q02788 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Col6a2Q02788 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.77□□□□□ -0.04
Col6a2Q02788 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.77□□□□□ -0.04
Col6a2Q02788 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col6a2Q02788 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col6a2Q02788 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Col6a2Q02788 Mir449b-201ENSMUST00000104833 80 ntBASIC14.77□□□□□ -0.05
Col6a2Q02788 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.77□□□□□ -0.05
Col6a2Q02788 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
Col6a2Q02788 Gm10576-201ENSMUST00000191927 825 ntBASIC14.77□□□□□ -0.05
Col6a2Q02788 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.77□□□□□ -0.05
Col6a2Q02788 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Col6a2Q02788 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a2Q02788 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.77□□□□□ -0.05
Col6a2Q02788 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.77□□□□□ -0.05
Col6a2Q02788 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a2Q02788 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a2Q02788 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a2Q02788 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Col6a2Q02788 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Asic1-205ENSMUST00000228185 1818 ntBASIC14.76□□□□□ -0.05
Col6a2Q02788 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Col6a2Q02788 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Col6a2Q02788 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms