Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Npas1P97459 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Npas1P97459 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Npas1P97459 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.45□□□□□ -0.42
Npas1P97459 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.45□□□□□ -0.42
Npas1P97459 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.45□□□□□ -0.42
Npas1P97459 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.45□□□□□ -0.42
Npas1P97459 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.45□□□□□ -0.42
Npas1P97459 Gm18032-201ENSMUST00000222541 538 ntBASIC12.45□□□□□ -0.42
Npas1P97459 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Npas1P97459 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Npas1P97459 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Npas1P97459 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Npas1P97459 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Npas1P97459 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Npas1P97459 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Npas1P97459 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.44□□□□□ -0.42
Npas1P97459 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Npas1P97459 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.44□□□□□ -0.42
Npas1P97459 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Npas1P97459 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.44□□□□□ -0.42
Npas1P97459 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.44□□□□□ -0.42
Npas1P97459 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.44□□□□□ -0.42
Npas1P97459 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Npas1P97459 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Npas1P97459 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Npas1P97459 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.44□□□□□ -0.42
Npas1P97459 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Npas1P97459 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Npas1P97459 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Npas1P97459 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Npas1P97459 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Npas1P97459 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npas1P97459 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.44□□□□□ -0.42
Npas1P97459 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Npas1P97459 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Npas1P97459 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Npas1P97459 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npas1P97459 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Npas1P97459 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Npas1P97459 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Npas1P97459 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Npas1P97459 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms