Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lig3P97386 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Lig3P97386 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Lig3P97386 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lig3P97386 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lig3P97386 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lig3P97386 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Lig3P97386 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lig3P97386 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lig3P97386 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lig3P97386 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.19■□□□□ 0.18
Lig3P97386 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lig3P97386 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.19■□□□□ 0.18
Lig3P97386 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.19■□□□□ 0.18
Lig3P97386 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Lig3P97386 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.19■□□□□ 0.18
Lig3P97386 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.19■□□□□ 0.18
Lig3P97386 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Lig3P97386 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lig3P97386 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lig3P97386 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lig3P97386 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.18■□□□□ 0.18
Lig3P97386 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.18■□□□□ 0.18
Lig3P97386 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Lig3P97386 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.18■□□□□ 0.18
Lig3P97386 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Gm11745-201ENSMUST00000121669 448 ntBASIC16.18■□□□□ 0.18
Lig3P97386 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Mir6990-201ENSMUST00000183724 91 ntBASIC16.18■□□□□ 0.18
Lig3P97386 Gm27301-201ENSMUST00000184012 127 ntBASIC16.18■□□□□ 0.18
Lig3P97386 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.18■□□□□ 0.18
Lig3P97386 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lig3P97386 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.18■□□□□ 0.18
Lig3P97386 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Lig3P97386 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lig3P97386 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.17■□□□□ 0.18
Lig3P97386 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Lig3P97386 Gm11424-201ENSMUST00000121929 829 ntBASIC16.17■□□□□ 0.18
Lig3P97386 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.17■□□□□ 0.18
Lig3P97386 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.17■□□□□ 0.18
Lig3P97386 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Mir6977-201ENSMUST00000184960 64 ntBASIC16.17■□□□□ 0.18
Lig3P97386 Gm43474-201ENSMUST00000196415 774 ntBASIC16.17■□□□□ 0.18
Lig3P97386 Gm45747-201ENSMUST00000212203 999 ntBASIC16.17■□□□□ 0.18
Lig3P97386 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.17■□□□□ 0.18
Lig3P97386 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.17■□□□□ 0.18
Lig3P97386 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lig3P97386 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lig3P97386 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms